Alright some progress has been made. New gaskets on the bottom sides and the windshield header gasket installed(It was completely missing).
My order of monstaliner in the spice color arrived. If I don't like the way it looks with my current spice colored soft upper I will be switching to them to some black uppers.
Last person who had this had put this giant hole near the front and just filled it with silicone and it was a mess.
Bondo to the rescue.
First time using it and I'm not to mad about it. Since its being covered in a bedliner like material I just needed the hole to be gone.
Now that all is left to do is clean it down with acetone and tape off all the windows...and have about 3 hours to get the monstaliner product painted.